Full thread dump:

"FileSystem Cache Queue" daemon prio=2 tid=0xc4b51a8 nid=0x2c0 waiting on monitor [0xff1f000..0xff1fdc4]
        at java.lang.Thread.sleep(Native Method)
        at org.netbeans.modules.vcscore.cache.CacheQueue.run(CacheQueue.java:43)


"Thread-3" prio=7 tid=0xc4ab4a0 nid=0x68c runnable [0xfa1f000..0xfa1fdc4]
        at java.net.PlainSocketImpl.socketAccept(Native Method)
        at java.net.PlainSocketImpl.accept(PlainSocketImpl.java:413)
        at java.net.ServerSocket.implAccept(ServerSocket.java:241)
        at java.net.ServerSocket.accept(ServerSocket.java:222)
        at org.apache.tomcat.service.PoolTcpEndpoint.acceptSocket(PoolTcpEndpoint.java:286)
        at org.apache.tomcat.service.TcpWorkerThread.runIt(PoolTcpEndpoint.java:402)
        at org.apache.tomcat.util.ThreadPool$ControlRunnable.run(ThreadPool.java:498)
        at java.lang.Thread.run(Thread.java:484)

"StandardManager" daemon prio=7 tid=0xc43ac38 nid=0x894 waiting on monitor [0xf91f000..0xf91fdc4]
        at java.lang.Thread.sleep(Native Method)
        at org.apache.tomcat.session.StandardManager.threadSleep(StandardManager.java:490)
        at org.apache.tomcat.session.StandardManager.run(StandardManager.java:547)
        at java.lang.Thread.run(Thread.java:484)

"Thread-2" daemon prio=7 tid=0xc43d918 nid=0x8a0 waiting on monitor [0xf01f000..0xf01fdc4]
        at java.lang.Object.wait(Native Method)
        at java.lang.Object.wait(Object.java:420)
        at org.apache.tomcat.util.Queue.pull(Queue.java:89)
        at org.apache.tomcat.logging.LogDaemon$1.run(TomcatLogger.java:238)
        at org.apache.tomcat.logging.LogDaemon.run(TomcatLogger.java:254)

"org.netbeans.core.ModuleActions-1" daemon prio=2 tid=0xc3f6d48 nid=0x8e8 runnable [0xee1f000..0xee1fdc4]
        at java.net.PlainSocketImpl.socketClose(Native Method)
        at java.net.PlainSocketImpl.close(PlainSocketImpl.java:459)
        at java.net.ServerSocket.close(ServerSocket.java:263)
        at org.apache.tomcat.service.PoolTcpEndpoint.stopEndpoint(PoolTcpEndpoint.java:273)
        at org.apache.tomcat.service.PoolTcpConnector.stop(PoolTcpConnector.java:197)
        at org.apache.tomcat.core.ContextManager.stop(ContextManager.java:537)
        at org.netbeans.modules.httpserver.HttpServerModule.stopHTTPServer(HttpServerModule.java:168)
        at org.netbeans.modules.httpserver.HttpServerModule.close(HttpServerModule.java:80)
        at org.netbeans.core.modules.NbInstaller.close(NbInstaller.java:622)
        at org.netbeans.core.modules.ModuleManager.shutDown(ModuleManager.java:956)
        at org.netbeans.core.modules.ModuleSystem.shutDown(ModuleSystem.java:291)
        at org.netbeans.core.NbTopManager.exit(NbTopManager.java:696)
        at org.netbeans.core.actions.SystemExit.performAction(SystemExit.java:54)
        at org.openide.util.actions.CallableSystemAction.actionPerformed(CallableSystemAction.java:69)
        at org.netbeans.core.ModuleActions$1.run(ModuleActions.java:105)
        at org.openide.util.Task.run(Task.java:152)
        at org.openide.util.RequestProcessor$ProcessorThread.run(RequestProcessor.java:622)

"Screen Updater" prio=4 tid=0xc473cc8 nid=0x8e0 waiting on monitor [0xd70f000..0xd70fdc4]
        at java.lang.Object.wait(Native Method)
        at java.lang.Object.wait(Object.java:420)
        at sun.awt.ScreenUpdater.nextEntry(ScreenUpdater.java:75)
        at sun.awt.ScreenUpdater.run(ScreenUpdater.java:95)

"Instance processor" daemon prio=2 tid=0xc42d108 nid=0x8d8 waiting on monitor [0xd40f000..0xd40fdc4]
        at java.lang.Object.wait(Native Method)
        at org.openide.util.RequestProcessor$ProcessorThread.run(RequestProcessor.java:581)

"Winsys Processor" daemon prio=2 tid=0xc316bf8 nid=0x8d4 waiting on monitor [0xd2ff000..0xd2ffdc4]
        at java.lang.Object.wait(Native Method)
        at org.openide.util.RequestProcessor$ProcessorThread.run(RequestProcessor.java:581)

"Folder Instance Processor" daemon prio=2 tid=0xc37ce40 nid=0x8c4 waiting on monitor [0xcfff000..0xcfffdc4]
        at java.lang.Object.wait(Native Method)
        at org.openide.util.RequestProcessor$ProcessorThread.run(RequestProcessor.java:581)

"OpenIDE Request Processor-1" daemon prio=10 tid=0xc3d73a8 nid=0x8c8 waiting on monitor [0xceff000..0xceffdc4]
        at java.lang.Object.wait(Native Method)
        at org.openide.util.RequestProcessor$ProcessorThread.run(RequestProcessor.java:581)

"Java source parsing" daemon prio=2 tid=0xac0f7d0 nid=0x8c0 waiting on monitor [0xccef000..0xccefdc4]
        at java.lang.Object.wait(Native Method)
        at org.openide.util.RequestProcessor$ProcessorThread.run(RequestProcessor.java:581)

"JarFs - modification watcher" daemon prio=2 tid=0xc387e30 nid=0x8bc waiting on monitor [0xcbef000..0xcbefdc4]
        at java.lang.Object.wait(Native Method)
        at org.openide.util.RequestProcessor$ProcessorThread.run(RequestProcessor.java:581)

"Automount" daemon prio=2 tid=0xac0b8f8 nid=0x8b8 waiting on monitor [0xcaef000..0xcaefdc4]
        at java.lang.Object.wait(Native Method)
        at org.openide.util.RequestProcessor$ProcessorThread.run(RequestProcessor.java:581)

"EntityCatalog/parser" daemon prio=2 tid=0xc2f99f0 nid=0x8b4 waiting on monitor [0xc9ef000..0xc9efdc4]
        at java.lang.Object.wait(Native Method)
        at org.openide.util.RequestProcessor$ProcessorThread.run(RequestProcessor.java:581)

"Folder recognizer" daemon prio=7 tid=0xabfe158 nid=0x7bc waiting on monitor [0xc8ef000..0xc8efdc4]
        at java.lang.Object.wait(Native Method)
        at org.openide.util.RequestProcessor$ProcessorThread.run(RequestProcessor.java:581)

"TimerQueue" daemon prio=5 tid=0xc2eb418 nid=0x8b0 waiting on monitor [0xc7ef000..0xc7efdc4]
        at java.lang.Object.wait(Native Method)
        at javax.swing.TimerQueue.run(TimerQueue.java:232)
        at java.lang.Thread.run(Thread.java:484)

"Thread-1" daemon prio=5 tid=0xac53fd8 nid=0x764 waiting on monitor [0xc2df000..0xc2dfdc4]
        at java.lang.Object.wait(Native Method)
        at java.lang.Object.wait(Object.java:420)
        at org.netbeans.core.modules.ChangeFirer.run(ChangeFirer.java:94)

"OpenIDE Request Processor-0" daemon prio=2 tid=0xac3f648 nid=0x628 runnable [0xc1df000..0xc1dfdc4]
        at java.lang.Object.wait(Native Method)
        at org.openide.util.RequestProcessor$ProcessorThread.run(RequestProcessor.java:581)

"AWT-Windows" prio=5 tid=0xa4ee10 nid=0x820 runnable [0xb7af000..0xb7afdc4]
        at sun.awt.windows.WToolkit.eventLoop(Native Method)
        at sun.awt.windows.WToolkit.run(WToolkit.java:186)
        at java.lang.Thread.run(Thread.java:484)

"SunToolkit.PostEventQueue-0" prio=5 tid=0xa4e818 nid=0x878 waiting on monitor [0xb6af000..0xb6afdc4]
        at java.lang.Object.wait(Native Method)
        at java.lang.Object.wait(Object.java:420)
        at sun.awt.PostEventQueue.run(SunToolkit.java:496)

"AWT-EventQueue-0" prio=7 tid=0xabd0f10 nid=0x114 waiting on monitor [0xb5af000..0xb5afdc4]
        at java.lang.Object.wait(Native Method)
        at java.lang.Object.wait(Object.java:420)
        at java.awt.EventQueue.getNextEvent(EventQueue.java:240)
        at java.awt.EventDispatchThread.pumpOneEvent(EventDispatchThread.java:101)
        at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:93)
        at java.awt.EventDispatchThread.run(EventDispatchThread.java:84)

"Signal Dispatcher" daemon prio=10 tid=0xa29d18 nid=0x768 waiting on monitor [0..0]

"Finalizer" daemon prio=9 tid=0x991e20 nid=0x308 waiting on monitor [0xb04f000..0xb04fdc4]
        at java.lang.Object.wait(Native Method)
        at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:108)
        at java.lang.ref.ReferenceQueue.remove(ReferenceQueue.java:123)
        at java.lang.ref.Finalizer$FinalizerThread.run(Finalizer.java:162)

"Reference Handler" daemon prio=10 tid=0xab503a8 nid=0x744 waiting on monitor [0xaf4f000..0xaf4fdc4]
        at java.lang.Object.wait(Native Method)
        at java.lang.Object.wait(Object.java:420)
        at java.lang.ref.Reference$ReferenceHandler.run(Reference.java:110)

"main" prio=5 tid=0x944c68 nid=0x888 waiting on monitor [0..0x12d180]

"VM Thread" prio=5 tid=0xabbe1e8 nid=0x880 runnable

"VM Periodic Task Thread" prio=10 tid=0xa29be0 nid=0x604 waiting on monitor