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This issue is related to issue 212399. There is no way to customize required JavaFX runtime version for JavaFX project. It is worth property to add just like we have JDK source/target version level.
fixed in jetmain http://hg.netbeans.org/jet-main/rev/301e1a34bbec
Integrated into 'main-golden', will be available in build *201303232300* on http://bits.netbeans.org/dev/nightly/ (upload may still be in progress) Changeset: http://hg.netbeans.org/main-golden/rev/301e1a34bbec User: Petr Somol <psomol@netbeans.org> Log: #212400 - Allow to select required JavaFX runtime version