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If a source root (e.g. $projdir/src) is renamed, no refactoring should be invoked; the Java files are still in the same relative package positions. See issue #49776 for background.
Dan, please try to fix this.
Checking in RefactoringOperationListener.java; /cvs/refactoring/src/org/netbeans/modules/refactoring/ui/RefactoringOperationListener.java,v <-- RefactoringOperationListener.java new revision: 1.12; previous revision: 1.11