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For packages it is possible to use the wildcard notation to specify that the package and all its descendants will be treated as profiling roots. Following this logic it should behave the same way for classes.
Fixed in profiler-main changeset: 206419:309b29a69e07 user: Tomas Hurka <thurka@netbeans.org> date: Mon Nov 07 13:45:07 2011 +0100 summary: bugfix #203446, enable root method in the form <class_name>$**
Integrated into 'main-golden' Changeset: http://hg.netbeans.org/main-golden/rev/309b29a69e07 User: Tomas Hurka <thurka@netbeans.org> Log: bugfix #203446, enable root method in the form <class_name>$**
Integrated into 'main-golden' Changeset: http://hg.netbeans.org/main-golden/rev/4dd56f627e75 User: Jaroslav Bachorik <yardus@netbeans.org> Log: Issue #204783 - Methods and Constructor nodes are missing in Root method selector Adjusting the ClassNode full-check signature to the change introduced in #203446 ("<class_name>$**" signature means all methods from the class and its inner classes rescursively)